The measured problem (330MB DMG / 1066MB app): electron-builder's
dependency collector packed the whole production dep tree into
app.asar (502MB) regardless of the files allow-list, because
normalizeFiles turns the array into one {filter} fileSet whose
entries ALL feed the per-dep copier (its implicit '**/*' passing
everything), and unpacked the native rungs into a 150MB
app.asar.unpacked. The launcher needs nothing but electron + node
builtins — the server ships via extraResources.
The fix (electron-builder.yml files): gitignore-style negation
ordering — '!**/*' first excludes everything, then only
electron/** and package.json re-include. The same list reaches the
per-dep filter, where app-builder-lib's destination-path quirk
(stat.moduleFullFilePath in util/filter.js) means no dep file can
ever re-include: all 566 modules collect zero files (DEBUG-mode
verified). Locale trim rides along (mac.electronLanguages: en).
Result on a fresh desktop:dist: app.asar 502MB -> 16KB (shell only:
electron/main.cjs, preload.cjs, package.json), app.asar.unpacked
gone, Frameworks 288MB -> 239MB, app 1066MB -> 367MB, DMG 330MB ->
144MB. Resources/server curation untouched (127MB, sharp native +
pdfjs traced and verified live).
Live verification against the packaged app: server spawn via
ELECTRON_RUN_AS_NODE on its kernel-assigned port, model slots via
PUT /api/settings/models, chat round-trip streaming an exact echo,
read tool on a PDF through the pdfjs path (exact text extracted),
image attach through the vision slot, GET /api/graph snapshot and
render-settings.
Docs full-accuracy pass (owner-approved scope): README +
docs/architecture.md swept of the dead embeddings / graph-context
injection / cluster-namer / semantic-clusters story (wave-7
casualties), MODELS/config roster rewritten to the BYOK slot
chain, EXTRACTION.chunkTokens -> graph.extractionChunkTokens,
route count 16 -> 25, steer_ctx_ dropped, seam table re-pointed at
the prober graph tools; docs/research/stt.md:50's "we already ship
transformers.js" premise corrected; config.ts orphaned EXTRACTION
doc block (left over from eed4b4e) deleted.
Note for master: npm prune still owed in the master tree (~690MB
stale @huggingface/onnxruntime trees absent from the lockfile);
worktree tree is clean and verified.
The minimal implementation of the 2026-09-02 graph vision (docs/vision.md §1):
- contracts/graph.ts: every node is a TRUE proposition (statement is both
rendering label and identity key; required description; no kind, no name).
Edges are follows (derivable) / supports (grounds without entailing) with
message-granular provenance points {chatId, messageId}. Events reduce to
correct/miss/dont-know plus observation (understanding notes); no taught
events, no misconception kind.
- extraction.ts: extractor is TREE-BLIND (transcript only, no plan tree) and
free-form; auditor sees findings + the current graph, owns faithfulness and
identity (link-or-create verdict per proposition, recorded as linkTo);
transcriptView tags every line with its message id (provenance anchors).
- core/graph.ts merger: applies verdicts deterministically — linkTo appends
a link line (phrasings join aliases, provenance unions; reads merge by id),
absent creates; NO string matching anywhere. Quiz events rebuilt from tool
parts with attribution-only nodeId resolution; understanding notes become
observation events (obs:<sourceId>); mapping lines are the verdict audit
trail and make re-merges idempotent.
- deriveNodeStates: transitional — latest quiz event wins (known/missed/
dont-know, else candidate); taught unreachable until the state-model
ideation lands.
- graph-context.ts + 50-graph-context.md: follows chains, hotspot grouping,
state vocabulary updated for the new event kinds.
- graph-view.tsx: node label is the statement; detail shows statement +
description.
- tests: merger verdicts (link, no-string-match, cross-chat assertions),
tree-blind pipeline end-to-end, follows vocabulary in context tests.
276/276 green.
README mermaid + layout + protocol paragraph now describe the merged
protocol: server-executed job tools ack mid-turn, runners steer the
teacher later via the wake pipeline (server/jobs.ts), client adopts
wake turns via turnInFlight and renders steers as artifacts.
architecture.md turn-composition seam 3 rewritten; runner dependency
signature updated (deliver seam).
MODELS in config.ts is now THE single tuning table: model id + OpenRouter
reasoning effort for teacher/researcher/demoBuilder/visualMaker/extractor/
auditor. .env.local is secrets-only (LH_* model vars removed; all sub-agents
previously had NO reasoning setting -> provider-default unbounded thinking,
the extraction token burn). One factory (src/agent/models.ts modelFor) wires
all six call sites; test injection unchanged. EXTRACTION.everyNQuizAnswers
moved to a config literal too. Plus the §5 one-line-per-seam logging in the
extraction pipeline: pipeline start, extractor/auditor start + per-step,
audit kept, merged — previously silent until completion, which made live
runs look like they never fired.
Replaces the pre-pivot v0 scaffold doc (preserved in git history) with
the as-built spec: the five layers and their dependency directions, the
machine-enforced import law (four zones + the two documented-only
rules), ports/adapters and the two composition roots, the extraction
pipeline as sole graph writer (division of trust, merger invariants,
probe-attribution resolution, the v1 trigger seam), the pure read
channel, the turn seams, minimal observability, the testing strata, and
the deferred-with-links list. The doc states it describes the system,
not an intention — it changes with the commit that changes the system.
README reference updated (was: 'pre-pivot v0 scaffold — history only').
amosblomqvist