The persisted (chatId, sourceId)→node table was a shared namespace across
independent chunk/batch jobs: each chunk's extractor mints local ids fresh
(p1..pN), so later chunks collided with earlier ones — propositions silently
skipped as 'already resolved' (coverage checkpointed anyway: permanent silent
loss) and edges resolved onto the wrong nodes (the 'everything links to
everything' mush). Owner ruling 2026-09-29: mergeFindings resolves THIS job's
ids in memory, nothing persists between jobs; cross-job identity is the
auditor's linkTo verdicts alone.
- contracts: NodeMapping dies; NotesSource.contentFp — sha256 of the text at
the last run, the re-import guard (unchanged re-import = TRUE no-op, no
model calls, no usage; changed text re-runs; legacy unstamped sources
re-run once)
- merger: job-local resolution map, in-submit duplicate ids skip once,
edges resolve extractor-local ids only
- ports/store: appendMapping/readMappings, LEDGER_FILES.mappings,
rewriteLedgers.mappings gone (stale data/graph/mappings.jsonl just stops
being read)
- session-clusters: birthSessionOf is provenance-only — the legacy
mapping-line fallback for provenance-empty notes nodes dies
- deletion: no mapping rows to strip; stats lose mappingsRemoved
- replay-layout batches nodes by first provenance point
- graph.test pins the new independence semantics (re-merge re-creates;
duplicate ids within one submit resolve once); extraction tests pin
per-chunk merges + the fingerprint guard
Part 1 — the ledger + remnants interlude (master-dispatched, owner ruling
2026-09-23: nothing configures the graph beyond chat models):
- The embedding ledger surface is gone: readEmbeddings/writeEmbeddings
ports, the EmbeddingsLedger contract, EMBEDDINGS_FILE (config, store
impls, graphRevision source list), and graph-deletion's vector-pruning
step. On-disk data files stay untouched (inert history).
- The extraction embedder seam dies wholesale: ExtractionPipelineDeps
drops the embedder dep (chat-handler + backfill/import-notes stubs go
with it), the 'embedding' phase leaves ExtractionPhase, the usage
capture/persist helpers die, and stages.embedding leaves
ExtractionRunUsage (historical records keep their shape — reads are
lenient). Extraction is two stages again, like the local-embedder era.
- Consumer-less remnants: latestQuizOutcomes + QUIZ_EVENT_KINDS,
clusterContentId, matchClusterLabelings + Community + ClusterLabeling,
the readClusterLabels/appendClusterLabel port seams + store impls +
LEDGER_FILES.clusterLabels. NamingRunUsage/readNamingRuns STAY
(standing ruling — the cost pill renders historical naming spend);
clusterHue + MIN_CLUSTER_SIZE stay (live).
- The 'labeler' role dies: BACKGROUND_MODEL_ROLES, ROLE_SLOT, ModelRole,
the catalog pin projections, and the UI roster strings. RolePins keys
shrink with the union.
The notes birth fallback (owner-approved 2026-09-23, surfaced by the
interlude's live smoke: production notes imports create provenance-EMPTY
nodes (importNotes passes messages: null — the file's anchor is the
mapping line), so the provenance-only birth rule left every imported
file unclustered and invisible to the prober's session list, against the
locked file-birth ruling. A provenance-empty node now births under its
FIRST mapping line's chatId (ledger order); only notes-born nodes ever
hit the fallback (chat nodes always carry provenance; a re-encountered
node's link-append re-opens the provenance rule). Deletion-safe: mapping
lines of deleted chats are stripped alongside their provenance.
Live-verified on port 3004: a fresh notes import clusters under its
src_ id with the file path as the label, end to end with no embedder.
845/845 tests, typecheck/lint/build green.
EOF
)
Embeddings are dying (chunk B removes the machinery); the clusters they
used to carry become the session that created them — derived on read.
- New src/core/session-clusters.ts: birthSessionPartition groups merged
nodes by their FIRST SURVIVING provenance point's chatId (owner-locked
2026-09-23). Deletion is self-healing by construction: stripped-birth
survivors re-attribute to their earliest remaining contributor, and
empty-provenance nodes stay unclustered. Notes imports are birth-sessions
too (owner ruling) — their label is the file path.
- graphSnapshot: clusters = the birth partition filtered >= MIN_CLUSTER_SIZE
(the hull presentation rule), id = session id, label = session name (chat
title / file path; a deleted record renders unlabeled). The persisted
cluster-labelings join dies; no LLM naming pass needed anymore.
- settleGraphLayout derives the same partition from readNodes — drops its
readEmbeddings dep. One cluster concept everywhere.
- Prober data seam (core/graph.ts, pure ports-driven like the snapshot):
graphSessionIndex (every birth session: id, name, chat|file kind,
createdAt/updatedAt, birth-proposition count, recency-ordered) and
graphSessionPropositions (a session's birth propositions with the
extractor's latest understanding level and THAT event's own timestamp —
owner ruling: quiz outcomes are ledger evidence, they never move the
evaluation date). Teacher's tool handlers consume these in-process.
- New agent.graphTools subsection { enabled?: boolean } (owner ruling:
the toggle gates prober tool REGISTRATION — agent capability, agent
section, its own subsection, NOT the tool-toggles map; absent = ON).
Lenient sanitizer, strict settings-body parser, passthrough resolution,
and graphToolsEnabled(effective) = graph.enabled && toggle for Teacher's
registry wiring.
Gates: tsc clean, eslint clean, 923/923 tests, next build compiles.
Live-verified on the worktree dev data: 10 nodes → 2 clusters labeled
with their chat titles; session index + propositions carry levels and
their own timestamps.
amosblomqvist